| Rank | LW | Release
| Gross | %± LW | Theaters | Change | Average | Total Gross | Weeks | Distributor
| New This Week
| Estimated
|
|---|
| 1 | 1 | 20th Century Boys 3: Redemption | $5,739,027 | -37.4% | 374 | - | $15,344 | $22,893,123 | 2 | Toho | false | false |
| 2 | - | Ballad | $2,493,590 | - | 331 | - | $7,533 | $2,493,590 | 1 | Toho | true | false |
| 3 | - | The Taking of Pelham 123 | $1,740,397 | - | 308 | - | $5,650 | $1,740,397 | 1 | Sony Pictures Releasing | true | false |
| 4 | 2 | Night at the Museum: Battle of the Smithsonian | $801,979 | -40.7% | 480 | -85 | $1,670 | $20,742,259 | 4 | 20th Century Fox International | false | false |
| 5 | 3 | Harry Potter and the Half-Blood Prince | $791,041 | -38.8% | 638 | -15 | $1,239 | $82,629,600 | 8 | Warner Bros. | false | false |
| 6 | 7 | Summer Wars | $601,281 | -19.6% | 129 | +1 | $4,661 | $13,555,058 | 6 | Warner Bros. | false | false |
| 7 | 5 | Hachi: A Dog's Tale | $590,103 | -40.5% | 344 | -2 | $1,715 | $19,035,375 | 5 | Shochiku | false | false |
| 8 | 4 | Kamen Rider Decade: All Riders vs. Dai-Shocker | $488,732 | -51.8% | 322 | -5 | $1,517 | $19,418,091 | 5 | Toei Company | false | false |
| 9 | 8 | Amalfi: Rewards of the Goddess | $419,339 | -39.7% | 317 | -9 | $1,322 | $36,902,266 | 8 | Toho | false | false |
| 10 | 10 | Transporter 3 | $368,261 | -38.7% | 161 | - | $2,287 | $6,080,399 | 5 | Asmik Ace Entertainment | false | false |
| 11 | 6 | Pokémon: Arceus and the Jewel of Life | $363,607 | -57.8% | 321 | -20 | $1,132 | $48,412,133 | 8 | Toho | false | false |
| 12 | 11 | Oblivion Island: Haruka and the Magic Mirror | $314,594 | -45% | 211 | - | $1,490 | $3,130,376 | 3 | Toho | false | false |
| 13 | 9 | Taken | $299,313 | -52.2% | 237 | -2 | $1,262 | $3,991,181 | 3 | 20th Century Fox International | false | false |
| 14 | - | Yatterman 2009 Re-release | $289,815 | - | 210 | - | $1,380 | $2,531,422 | 3 | Shochiku | false | false |
| 15 | 14 | Evangelion: 2.0 You Can (Not) Advance | $249,058 | -40.3% | 86 | -32 | $2,896 | $39,044,195 | 11 | The Klockworx | false | false |
| 16 | 15 | Rocketmen | $55,572 | -31% | 98 | -6 | $567 | $1,169,480 | 3 | Sony Pictures Releasing | false | false |
| 17 | 16 | Cadillac Records | $16,895 | -21.7% | 5 | - | $3,379 | $231,170 | 4 | Sony Pictures Releasing | false | false |
| 18 | - | Rachel Getting Married | $523 | - | 1 | - | $523 | $350,962 | 21 | Sony Pictures Releasing | false | false |
